Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900331.1_cds_XP_016450400.1_44856
CDS Infomation

[gene=LOC107775211] [db_xref=GeneID:107775211] [protein=protein NEDD1-like] [protein_id=XP_016450400.1] [location=join(36775..36922,37000..37103,38533..38793,38920..39024,40251..40316,40447..40668,42040..42594,43332..43934,44141..44317,44394..44504)] [gbkey=CDS]
Sequence

ATGGATTCGATAAAGAGCTTGTTGGCGGCAAGTGGGGGTGACACAGTGAAGCTATTTGAC
CTGTCATTGGAACCGCGTGATCCCTGCATTCTTAGCTACACTCCTTCTCCTGGCTTCCTT
GTCAACTCCCTCAAGTGGAACTTTACTAATTTAGTGGTGGCAAGCGCTGGAGACGACAAG
AAGATATCTTTGTGGAGGAAAAATGGACAGAGTTTGGGGACTCTACCCACTGATGCTGGT
GACAATATCGAGGAGTCTATTTCAACAATTAACTTTAGCAGCAAAGCATCCAGATACATT
TGTTCTGGAGGCAGTGGTCAAGTTGTACGAATATGGGATTTGCAGCGGAGGCGTTGCATC
AAATGGTTGAAAGGTCATACTGATACTATTAGCGGTGTAATGTACAATTGCAAAGATGAG
CACTTAGCTTCTATCAGTCTTAATGGGAATCTCATACTTCACAACCTGGCTTCTGGTGCG
AAGGCTGCTGAACTCAAGGATCCAAATGAGCAGGTTTTGAGAGTCCTTGATTATTCCAAG
ATTAGCAGGCACTTATTGGTGACAGCTGGTGATGATGGATCGATCCACCTGTGGGATACT
ACTGGTCGCAGTCCCAAGGTTTCTTGGCTAAAGCAGCATTCTGCACCAACTTCTGGCGTT
AGTTTCTCACCATCAAATGACAAGATTGTTGCTAGTGTTGGTATGGATAAGAAGTTGTAC
ACTTTTGACTCAGGGTCAAGAAGGCCATCATTTTGCATTCCTTATGAGGCACCTTTTTCT
TCACTGGCATTTACTGATGATGGCTTCACTCTAACAGCTGGAACAAGTAGTGGCCGTGTG
GTATTCTACGACGTTCGTGGAAAACCACAACCTTTGACTGTTTTACGTGCTTATGGAACT
TCTGAGGCTGTGACAAGTCTATGCTGGCAAAGAGCAAAACCTGTAATGGTCAATGAAAAC
AATTGCACAACAGAAATAGCTCTTCTGGGCAGTGCTGTGGAGGATTCGATTTTAATGCCT
GACCCACTTCCTGCTACGACATCATCAAGCCTATCAACTTCCATGACAACATCAGGTTCC
AGAACCACTGTTCGTTCAGGTTCTGTGGACTCATTTTCTTTTCCAGCAGGCAATACGGGA
TCTACATCTGGGACACTAGGTTTATCTCCATCCGAGGAAACACCCATACGAAGTAGTTTG
TGGAAAGGTGGATCTTTGACACGATTACACGCTCCTCGTAACTTCAAGGATGATATGGAA
GTCTTTTCTCCTCTTAATGAAGTTCAGCCAATTACACCTTCACTTGATAAGTTTTGGGAT
GATCAGGAAGGTTTTAAAAAGGATCTTGATAAGAGATCATCTTTGCTATTTCCTTCTTCT
CGAAGGTTTCCACTTCCAGTTGAGGGTGGCAATGACAACCGCCTCATATTTGATTGGAAA
TCAAGTTCCTTGCCCAAACAGGAGGATACTTCTTCGGCACAGTTGTCTTCTACTCCTACA
TCTTTCCGTAGTGATGATTCTTCCTCCATAACTCCTCCAGAAGCTTGGGGTGGTGAGAGA
TTATCTGATAGATTATCTCACCTTCGGCAGTCAGGAAACATGCCTTCTCGTTTTGCAACA
TCGACATCTGGTCCTCTTGCACCAGGAACAATGTTCTCTGGATTACAGGATACTTTTCCA
GCAACTCAGAGTATCAGCTCTTCGAGCAATTCTAGTCTGAGTTTGGCAAATTTGCGCATT
AAAGAAAATTCAGATGAAGAAATTTCTCTAGGATCGTCAGAACATATCCCCTCTATTTCC
ACATCTTTTTCAGTTGGAATAAAAGGCATTACAGGGCAGGGTACTCTTGATTCTCTTGGT
TCAACTATGACCCTTCCACGAAGATTTTCCAGTTATGCTGAGAGAATAAGCACCAAGCCG
TCCTTCAGTGATGGAACCCTTTCTGTTGGTTCTCCAAAAACTAAGAAAACTGGAGCTGAA
ACAAGGGAGGAGCTTCTGAATAGCTTGTTGTCTAGGTCTGATACGTCATCTACTACAGCA
GCTGGTGCTTTCCAAGCAATGAATGGTGAAGTCAGACAATCACAAACATCCACACTGCCT
GAATTGCAGCAGGGAAGTTCCTTCCAACTCCAGCTGTTTGAACGTAAGCAGGAAGAAACT
TTGTCTTTCATTCAAAGAACCGTTCATGAGCAAATGAGGAATCTTCATTTAGAATTGATA
AGTCAAAATCATATGCTGCAGATGGAAATGTCTAGTCGTTATAACTTGATCTTGGACAAC
CAAAAGGTTCTCTTCGATCGCCAGACTTTGATATTGGAAAACCTAGCAGAGCTGATGAAG
AGGTTCAATTAG

Peptide Sequence

PEP ID

XP_016450400.1
PEP Infomation

PREDICTED: protein NEDD1-like [Nicotiana tabacum]
Sequence

MDSIKSLLAASGGDTVKLFDLSLEPRDPCILSYTPSPGFLVNSLKWNFTNLVVASAGDDK
KISLWRKNGQSLGTLPTDAGDNIEESISTINFSSKASRYICSGGSGQVVRIWDLQRRRCI
KWLKGHTDTISGVMYNCKDEHLASISLNGNLILHNLASGAKAAELKDPNEQVLRVLDYSK
ISRHLLVTAGDDGSIHLWDTTGRSPKVSWLKQHSAPTSGVSFSPSNDKIVASVGMDKKLY
TFDSGSRRPSFCIPYEAPFSSLAFTDDGFTLTAGTSSGRVVFYDVRGKPQPLTVLRAYGT
SEAVTSLCWQRAKPVMVNENNCTTEIALLGSAVEDSILMPDPLPATTSSSLSTSMTTSGS
RTTVRSGSVDSFSFPAGNTGSTSGTLGLSPSEETPIRSSLWKGGSLTRLHAPRNFKDDME
VFSPLNEVQPITPSLDKFWDDQEGFKKDLDKRSSLLFPSSRRFPLPVEGGNDNRLIFDWK
SSSLPKQEDTSSAQLSSTPTSFRSDDSSSITPPEAWGGERLSDRLSHLRQSGNMPSRFAT
STSGPLAPGTMFSGLQDTFPATQSISSSSNSSLSLANLRIKENSDEEISLGSSEHIPSIS
TSFSVGIKGITGQGTLDSLGSTMTLPRRFSSYAERISTKPSFSDGTLSVGSPKTKKTGAE
TREELLNSLLSRSDTSSTTAAGAFQAMNGEVRQSQTSTLPELQQGSSFQLQLFERKQEET
LSFIQRTVHEQMRNLHLELISQNHMLQMEMSSRYNLILDNQKVLFDRQTLILENLAELMK
RFN

Transcript Sequence

Gene sequence data has not been registered.